PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG021530.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 162aa    MW: 17491.8 Da    PI: 10.0423
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG021530.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.72.7e-1770107136
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkglk 36 
                       C++Cg ++  Tp++Rrgpdg++tLCnaCGl ++ kg++
  TRIDC6BG021530.2  70 CQHCGISSnnTPMMRRGPDGPRTLCNACGLAWANKGMM 107
                       *****99889*************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MASLMRFREK RKERNFDKKI RYSVRKEVAH RMQRHKGQFT SSKAKAEEAA AAANSDWGAV  60
EGRPLSAPVC QHCGISSNNT PMMRRGPDGP RTLCNACGLA WANKGMMREV KGHTPLKVVP  120
PATDDAQNGV AEAPTAEQQH LALEAAPEAP VAPAPAANGH DS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.28e-47GATA family protein