PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG021530.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 232aa    MW: 24671.9 Da    PI: 9.8861
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG021530.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.94.9e-17140177136
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkglk 36 
                       C++Cg ++  Tp++Rrgpdg++tLCnaCGl ++ kg++
  TRIDC6BG021530.3 140 CQHCGISSnnTPMMRRGPDGPRTLCNACGLAWANKGMM 177
                       *****99889*************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
PHGMEAGGAP QAPSNTLTLS FQGEVFVFES VSAEKVQAVL LLLGGRELGP GMGVGPSSSA  60
SYSKRLNSHR MASLMRFREK RKERNFDKKI RYSVRKEVAH RMQRHKGQFT SSKAKAEEAA  120
AAANSDWGAV EGRPLSAPVC QHCGISSNNT PMMRRGPDGP RTLCNACGLA WANKGMMREV  180
KGHTPLKVVP PATDDAQNGV AEAPTAEQQH LALEAAPEAP VAPAPAANGH DS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.25e-56GATA family protein