PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG021530.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 224aa    MW: 23864.1 Da    PI: 10.0832
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG021530.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA534.7e-17133170136
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkglk 36 
                       C++Cg ++  Tp++Rrgpdg++tLCnaCGl ++ kg++
  TRIDC6BG021530.5 133 CQHCGISSnnTPMMRRGPDGPRTLCNACGLAWANKGMM 170
                       *****99889*************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
GAPQAPSNTL TLSFQGEVFV FESVSAEKVQ AVLLLLGGRE LGPGMGVGPS SSASYSKRLN  60
SHRMASLMRF REKRKERNFD KKIRYSVRKE VAHRMQRHKG QFTSSKAKAE EAAAAANSDW  120
GAVEGRPLSA PVCQHCGISS NNTPMMRRGP DGPRTLCNAC GLAWANKGMM REVKGHTPLK  180
VVPPATDDAN GVAEAPTAEQ QHLALEAAPE APVAPAPAAN GHDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.24e-56GATA family protein