PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG022800.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-other
Protein Properties Length: 308aa    MW: 33669.6 Da    PI: 7.2014
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG022800.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox25.81.9e-0818581252
                      HHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS
          Homeobox 12 leeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52
                      +++L + F+++  p +e +e L+++lg++ +++  WF+N R
  TRIDC6BG022800.6 18 VDVLRKSFAESELPAREVKESLSTELGISFEKIDKWFKNTR 58
                      579************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MRKSNRRGEN SSEPVHGVDV LRKSFAESEL PAREVKESLS TELGISFEKI DKWFKNTRCA  60
ALRDRKAEGN SRVAGPSKRS RRSAGKSGSS GKIDSVDNSY LLPVSEIISV PTHPQGIPER  120
KPESTSRTVR RLVHDKGAPL CPPAEVKEST SPTTKPGSNP SHVADRIINT EHRAASREDP  180
VAFSDDPFFD AILSYPTINT NDRAVSQEDP VAFSDDPFLD VMLANRDIYT EERGVSHEDV  240
KRPSGDQPFL DVIQNVCGLE HRLQRLKGDM LSSGAAPGGA GTAERDLQNQ LLVLVPTVGN  300
NASVQRIP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29940.22e-12HB-PHD family protein