PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG023520.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Whirly
Protein Properties Length: 203aa    MW: 22167.3 Da    PI: 10.2219
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG023520.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly183.93e-57261632139
            Whirly   2 vyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkal 94 
                       v+k+kaal++ +++p f++l+sg  +++r+G+++l++ +a+++rkyd+ kkq fals+tev++l++l++ esceffhdp++k+s+eG+v+k+l
  TRIDC6BG023520.3  26 VFKGKAALSISPILPLFTKLESGGSRVNRNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLISLGPAESCEFFHDPSMKSSHEGQVKKSL 118
                       9******************************************************************************************** PP

            Whirly  95 kvePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139
                       ++ Pl    G+fvn++v n+++k+ne++svPv+kaefav+r++l+
  TRIDC6BG023520.3 119 SITPLGSDNGYFVNITVLNNVQKTNERLSVPVTKAEFAVMRTALS 163
                       ******999*********************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MLQALITSTS LSAESTSARK FASYTVFKGK AALSISPILP LFTKLESGGS RVNRNGSVML  60
TFFPAVGQRK YDYTKKQLFA LSPTEVGSLI SLGPAESCEF FHDPSMKSSH EGQVKKSLSI  120
TPLGSDNGYF VNITVLNNVQ KTNERLSVPV TKAEFAVMRT ALSFALPHIM GWDQALSTHP  180
QSTSTSASKP RFERPNPASE WDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71260.11e-75Whirly family protein