PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG023520.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Whirly

Protein Properties

Length: 166aa MW: 18120.8 Da PI: 10.2228

Description

Whirly family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG023520.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Whirly	111.7	5.5e-35	75	157	2	84
Whirly 2 vyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakg 84 v+k+kaal++ +++p f++l+sg +++r+G+++l++ +a+++rkyd+ kkq fals+tev++l++l++ esceffhdp++k+ TRIDC6BG023520.5 75 VFKGKAALSISPILPLFTKLESGGSRVNRNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLISLGPAESCEFFHDPSMKS 157 9*******************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence
ALPAFPFPGA WARPTTDEQA TMLRLSRFLP STSRGVTDLK DVLWSSSLTF KHALSTSAAN 60 VDESTSARKF ASYTVFKGKA ALSISPILPL FTKLESGGSR VNRNGSVMLT FFPAVGQRKY 120 DYTKKQLFAL SPTEVGSLIS LGPAESCEFF HDPSMKSRFG IVLCKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71260.1	2e-42	Whirly family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG023520.5