PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG023520.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Whirly
Protein Properties Length: 115aa    MW: 12677.5 Da    PI: 9.0617
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG023520.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly143.96.3e-45110535139
            Whirly  35 llelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlpdGsGlfvnlsvtnslvkgnesfsvPvs 127
                       +l++ +a+++rkyd+ kkq fals+tev++l++l++ esceffhdp++k+s+eG+v+k+l++ Pl    G+fvn++v n+++k+ne++svPv+
  TRIDC6BG023520.6   1 MLTFFPAVGQRKYDYTKKQLFALSPTEVGSLISLGPAESCEFFHDPSMKSSHEGQVKKSLSITPLGSDNGYFVNITVLNNVQKTNERLSVPVT 93 
                       89****************************************************************999************************ PP

            Whirly 128 kaefavlrsllv 139
                       kaefav+r++l+
  TRIDC6BG023520.6  94 KAEFAVMRTALS 105
                       *********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
MLTFFPAVGQ RKYDYTKKQL FALSPTEVGS LISLGPAESC EFFHDPSMKS SHEGQVKKSL  60
SITPLGSDNG YFVNITVLNN VQKTNERLSV PVTKAEFAVM RTALSVSFHA AILTY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71260.16e-48Whirly family protein