PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG023640.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 251aa    MW: 29055.3 Da    PI: 9.1497
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG023640.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.83e-0712515291
               FAR1 52 rrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91
                        +++ + +++C+a +++  ++d+ w+++k ++ HnH+l+p
  TRIDC6BG023640.11 12 VENTRSCQCECQALIRLLWTEDNGWYIAKHRESHNHSLSP 51
                       567788899999999999999****************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MHQVAMFGKA SVENTRSCQC ECQALIRLLW TEDNGWYIAK HRESHNHSLS PNFGETIHWS  60
SHKHFDVYSR DLRKHLRQNN VNLAKVYSIV GIFFGSMKNV PFKKRSLCNL CGQISREQSD  120
DNVRKTMEVF AEIGAKDPHF KYRVQPDKEG GIKNLMWASG SNRLQYTFSG SALTFDTTYM  180
TNLYDMPFRL FVGVNNHFQR VIPAGLIVCG ETVESFKWVF SEFLRIMGGA APKNYTYWQD  240
LHFIAVIYMV V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-24FAR1 family protein