PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG023640.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 237aa MW: 27339.2 Da PI: 9.3544

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG023640.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22.9	2.8e-07	12	51	52	91
FAR1 52 rrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +++ + +++C+a +++ ++d+ w+++k ++ HnH+l+p TRIDC6BG023640.3 12 VENTRSCQCECQALIRLLWTEDNGWYIAKHRESHNHSLSP 51 567788899999999999999****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MHQVAMFGKA SVENTRSCQC ECQALIRLLW TEDNGWYIAK HRESHNHSLS PNFGETIHWS 60 SHKHFDVYSR DLRKHLRQNN VNLAKVYSIV GIFFGSMKNV PFKKRSLCNL CGQISREQSD 120 DNVRKTMEVF AEIGAKDPHF KYRVQPDKEG GIKNLMWASG SNRLQYTFSG SALTFDTTYM 180 TNLYDMPFRL FVGVNNHFQR VIPAGLIVCG ETVESFKWVF SEFLRIMGGA APKNYTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-23	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG023640.3