PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG025750.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

DBB

Protein Properties

Length: 201aa MW: 20889.9 Da PI: 4.824

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG025750.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.9	1.5e-06	5	45	6	39
zf-B_box 6 CpeHeekelqlfCedCqqllCedClleeHkg.......Htv 39 C+ +++ e+ C ++ lC+ C + H+ H+v TRIDC6BG025750.1 5 CDACGQAEAAVLCCADEAALCRRCDAAVHSAnklagrhHRV 45 *****************************668899996655 PP
2	zf-B_box	27.2	8.2e-09	68	107	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + C+ ++ek +fC +++ llC++C ++H H TRIDC6BG025750.1 68 PACDICQEKTGYFFCVEDRALLCRSCDITIHTAtphastH 107 57****************************9556644455 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MKIGCDACGQ AEAAVLCCAD EAALCRRCDA AVHSANKLAG RHHRVALLSS APAGSSSPGT 60 GDDGGTHPAC DICQEKTGYF FCVEDRALLC RSCDITIHTA TPHASTHRRF LITGVRVGVD 120 QDHIGDVSGA TVGSPSNNSA NGSNSMPTSE NFAIANGQRS EEGAGLIGGG EDDIGQQQQW 180 PWSDIFAEDG VGMDQHQCYP G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	2e-43	DBB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG025750.1