PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG025950.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TALE

Protein Properties

Length: 246aa MW: 27939.6 Da PI: 7.6117

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG025950.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.1	1.3e-07	195	228	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + TRIDC6BG025950.3 195 KWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 228 469*****************************87 PP
2	ELK	27.2	8.7e-10	149	170	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L+++Y+++L+++++E++ TRIDC6BG025950.3 149 ELKSELKQGYKEKLVDIREEIM 170 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
LAGLFVVLTA YLSDLKCHTS RPARLYELPI SVFTSILFSS ALTSTDHLKC FYTHYVLLLC 60 SFKEQLQQHV RVHAMEAVMG CWELEQSLQS LTGASPGEGT GATMSDDEDN QVDSETNMFD 120 GNDGSDGMGF GPLILTEGER SLIERVRHEL KSELKQGYKE KLVDIREEIM RKRRAGKLPG 180 DTAATLKAWW QAHSKWPYPT EDDKARLVQE TGLQLKQINN WFINQRKRNW HSSNTASSSE 240 KTKKKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	226	246	RKRNWHSSNTASSSEKTKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	1e-119	TALE family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG025950.3