PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG026040.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 630aa    MW: 68636.5 Da    PI: 8.3331
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG026040.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.56.1e-28208261155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ +t+e+v+SHLQkYRl
  TRIDC6BG026040.4 208 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVENITRENVASHLQKYRL 261
                       79*******************.********************************8 PP
2Myb_DNA-binding36.51.1e-11210260148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W+ e++ ++v av+qlG +   +k+I   m+ ++ t++++ s++qky+
  TRIDC6BG026040.4 210 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvENITRENVASHLQKYR 260
                       678***********************************************7 PP
3Response_reg79.89.4e-27301381109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl vdD+p+ +++l+++l++ +y +v+++ ++  al++l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++a+ge +++ + + 
  TRIDC6BG026040.4  30 VLAVDDDPTCLKVLENLLRRCDY-HVTTTGQAATALRMLRENKdqFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGETQTVMKGIT 120
                       799********************.***************888889*******************87754.558******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp+  e+l +
  TRIDC6BG026040.4 121 HGACDYLLKPVRLEQLKT 138
                       ***************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 630 aa     Download sequence    
DTRRKMTVEG RVSGGGDGGG KDKFPVGMRV LAVDDDPTCL KVLENLLRRC DYHVTTTGQA  60
ATALRMLREN KDQFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG ETQTVMKGIT  120
HGACDYLLKP VRLEQLKTIW QHVIRRNTKN RGSDNDDAGQ KGPNAEGENG GANRNKRQSR  180
RDRDENGDDG DDSDENSNDN GDSSSQKKPR VVWSVELHRK FVAAVNQLGI DKAVPKKILD  240
LMNVENITRE NVASHLQKYR LYLKRMSMDA SRQANLVAAL GGRNPAYSNM NSMDVFRHYS  300
NTYGRYRPVP TSNHSQSNNL VARMNSPSAY GMHGLLSPQS QPLHLGHAQN NLGTSLNDLG  360
VNNGNLIRGA HMSTMVTGTS GNSFANISNG APLAPTNRAV QSLESNNRQH LGRINSSSTD  420
SFSSFASDSP HFPDLGRSSN TWQTAVPSNI QQLGQNGSMS QASLHGNGPR MEPVSSYAPP  480
SNQITSLGND MQNQVAPLAS NSLPMVFNQG AAPFTFGNST NSREALNSNL AFSNSGINIS  540
LPNLRIDNSV VPRQTLDGGN TGGVPSLQDG KIDQQAVGNQ LNYNNNDLVG TSGLQRELSG  600
GLDDIVVDMF RPMHVWRSIP FKIRCTFILV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-105ARR-B family protein