PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG026040.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARR-B

Protein Properties

Length: 592aa MW: 64339.1 Da PI: 6.637

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG026040.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.6	5.6e-28	173	226	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ +t+e+v+SHLQkYRl TRIDC6BG026040.6 173 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVENITRENVASHLQKYRL 226 79*****************.******************************8 PP
2	Myb_DNA-binding	36.6	1.1e-11	175	225	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ ++ t++++ s++qky+ TRIDC6BG026040.6 175 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvENITRENVASHLQKYR 225 678***********************************************7 PP
3	Response_reg	57.7	6.5e-20	20	103	27	109
EEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 27 aeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 +++ ++ al++l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+ge +++ + + Ga d+l Kp+ e+l + TRIDC6BG026040.6 20 TTTGQAATALRMLRENKdqFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKT 103 5777888899999777778*****************87754.558*********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
LESAFFRPNT YARSDNLPFT TTGQAATALR MLRENKDQFD LVISDVHMPD MDGFKLLELV 60 GLEMDLPVIM LSANGETQTV MKGITHGACD YLLKPVRLEQ LKTIWQHVIR RNTKNRGSDN 120 DDAGQKGPNA EGENGGANRN KRQSRRDRDE NGDDGDDSDE NSNDNGDSSS QKKPRVVWSV 180 ELHRKFVAAV NQLGIDKAVP KKILDLMNVE NITRENVASH LQKYRLYLKR MSMDASRQAN 240 LVAALGGRNP AYSNMNSMDV FRHYSNTYGR YRPVPTSNHS QSNNLVARMN SPSAYGMHGL 300 LSPQSQPLHL GHAQNNLGTS LNDLGVNNGN LIRGAHMSTM VTGTSGNSFA NISNGAPLAP 360 TNRAVQSLES NNRQHLGRIN SSSTDSFSSF ASDSPHFPDL GRSSNTWQTA VPSNIQQLGQ 420 NGSMSQASLH GNGPRMEPVS SYAPPSNQIT SLGNDMQNQV APLASNSLPM VFNQGAAPFT 480 FGNSTNSREA LNSNLAFSNS GINISLPNLR IDNSVVPRQT LDGGNTGGVP SLQDGKIDQQ 540 AVGNQLNYNN NDLVGTSGLQ RELSGGLDDI VVDMFRPDND NGGIFDTDWG LV

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

LESAFFRPNT YARSDNLPFT TTGQAATALR MLRENKDQFD LVISDVHMPD MDGFKLLELV  60
GLEMDLPVIM LSANGETQTV MKGITHGACD YLLKPVRLEQ LKTIWQHVIR RNTKNRGSDN  120
DDAGQKGPNA EGENGGANRN KRQSRRDRDE NGDDGDDSDE NSNDNGDSSS QKKPRVVWSV  180
ELHRKFVAAV NQLGIDKAVP KKILDLMNVE NITRENVASH LQKYRLYLKR MSMDASRQAN  240
LVAALGGRNP AYSNMNSMDV FRHYSNTYGR YRPVPTSNHS QSNNLVARMN SPSAYGMHGL  300
LSPQSQPLHL GHAQNNLGTS LNDLGVNNGN LIRGAHMSTM VTGTSGNSFA NISNGAPLAP  360
TNRAVQSLES NNRQHLGRIN SSSTDSFSSF ASDSPHFPDL GRSSNTWQTA VPSNIQQLGQ  420
NGSMSQASLH GNGPRMEPVS SYAPPSNQIT SLGNDMQNQV APLASNSLPM VFNQGAAPFT  480
FGNSTNSREA LNSNLAFSNS GINISLPNLR IDNSVVPRQT LDGGNTGGVP SLQDGKIDQQ  540
AVGNQLNYNN NDLVGTSGLQ RELSGGLDDI VVDMFRPDND NGGIFDTDWG LV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	4e-84	ARR-B family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG026040.6