PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG027420.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 255aa    MW: 28204.8 Da    PI: 9.9387
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG027420.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP105.83e-331641578
                      -HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP 15 keyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78
                      keyhr+h+vCe+h+k+p v+v+g+e+rfCqqCsrfh lsefD++krsCrrrL++hn+rrrk+q+
  TRIDC6BG027420.2  1 KEYHRKHRVCEAHTKSPRVVVAGQERRFCQQCSRFHGLSEFDQKKRSCRRRLSDHNARRRKPQP 64
                      89***********************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
KEYHRKHRVC EAHTKSPRVV VAGQERRFCQ QCSRFHGLSE FDQKKRSCRR RLSDHNARRR  60
KPQPDAFSFA PARLPSSLMF DDRRQISFVW NKDPLSHGRP FPCSPWDSPS DFKLPQVKEI  120
REVSINGQVH FDKSHLPNAV PALSHDIPEL LPMKGPDASV TASKLGGAPD LQRALSLLSA  180
SSCGLPDPVQ QASCLVQFTG ASQNSRGPSP HGGSPPSVSC AEGQPMAPSP QFVRFTMDGA  240
SSGYESTFFG VNRMN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14461KKRSCRRRLSDHNARRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43270.12e-36SBP family protein