PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG027420.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 155aa    MW: 16969 Da    PI: 10.5268
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG027420.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP129.61.1e-4059136178
                       --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                       +CqvegC ++l +akeyhr+h+vCe+h+k+p v+v+g+e+rfCqqCsrfh lsefD++krsCrrrL++hn+rrrk+q+
  TRIDC6BG027420.3  59 RCQVEGCGVELRDAKEYHRKHRVCEAHTKSPRVVVAGQERRFCQQCSRFHGLSEFDQKKRSCRRRLSDHNARRRKPQP 136
                       6**************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MEWTAPKSTP LSPPHLLWDW GDAAAPGSSG EAAGRRGKEK RARGEGAGGG GGGGGGGVRC  60
QVEGCGVELR DAKEYHRKHR VCEAHTKSPR VVVAGQERRF CQQCSRFHGL SEFDQKKRSC  120
RRRLSDHNAR RRKPQPDAFS FAPARLPSSL MFDDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1116133KKRSCRRRLSDHNARRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43270.19e-40SBP family protein