PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG027450.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 362aa MW: 39214.6 Da PI: 8.1432

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG027450.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.9	1.1e-33	39	93	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl TRIDC6BG027450.3 39 KPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 93 79****************************************************8 PP
2	Myb_DNA-binding	71.7	1.1e-22	41	92	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ TRIDC6BG027450.3 41 RLRWTVELHERFVDAVAQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 92 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MFSSKKATSS SAGAVAVQGG GAPMCVQGDS GLVLTTDPKP RLRWTVELHE RFVDAVAQLG 60 GPDKATPKTI MRVMGVKGLT LYHLKSHLQK FRLGKQPHKD FNDHAVKDAA AAMEMHRNAA 120 SSSGIMGRNL NDHNVHMNEA IRMQMEVQRR LHEQLEVINQ PRIKVQKHLQ MRIEAQGKYM 180 QSILEKAYQT LATGDVAASP TAGYKSLGNH AGVLDVCSIK DIGPASMGFP SLQDLHLYGG 240 GHLDLQQQQP MESFFACSDG GGIGSLGKKR SSQYAGGKSP MMWGDDDDGG EDDKGDQLLQ 300 MAPPMMDDID SMYEAKPMMT MSGDSAGSRG FDGGMGSKLE RPSPRRPHMG AQRMDSPSVI 360 YG

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MFSSKKATSS SAGAVAVQGG GAPMCVQGDS GLVLTTDPKP RLRWTVELHE RFVDAVAQLG  60
GPDKATPKTI MRVMGVKGLT LYHLKSHLQK FRLGKQPHKD FNDHAVKDAA AAMEMHRNAA  120
SSSGIMGRNL NDHNVHMNEA IRMQMEVQRR LHEQLEVINQ PRIKVQKHLQ MRIEAQGKYM  180
QSILEKAYQT LATGDVAASP TAGYKSLGNH AGVLDVCSIK DIGPASMGFP SLQDLHLYGG  240
GHLDLQQQQP MESFFACSDG GGIGSLGKKR SSQYAGGKSP MMWGDDDDGG EDDKGDQLLQ  300
MAPPMMDDID SMYEAKPMMT MSGDSAGSRG FDGGMGSKLE RPSPRRPHMG AQRMDSPSVI  360
YG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	4e-81	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG027450.3