PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG028830.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 410aa    MW: 42854.4 Da    PI: 5.724
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG028830.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3082.2e-94424094373
              GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                       l+l+cA+ ++ gdl  a+++       a p+gd+  Rla++f++ALa r  +   + ++  pp +        + aa+ +++++ P+l+f+hl
  TRIDC6BG028830.2  42 LVLACADLLHRGDLDGARRAAGAALSGADPRGDAADRLAHHFARALALRADE---GRSSVGPPAAVGVGVAPASSAAHLAYNKIAPFLRFAHL 131
                       789*****************9999999***********************99...4444446666654445555566666************* PP

              GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl...va 183
                       taNqaIlea++g++rvHi+D+d+ +G+QWp+Llqa+ +R+    gpp++RiTg g+    + + l +tg+rL+ fA++l++pf+f++l    +
  TRIDC6BG028830.2 132 TANQAILEAAAGARRVHIVDLDAAHGVQWPPLLQAICDRAdaaVGPPEVRITGAGP----DLDVLLRTGDRLRAFASSLNLPFRFHPLllpCT 220
                       ***************************************988889***********....9***************************77666 PP

              GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsle 272
                        +l++ +   L+++p+E+laVn+vl lhrl   +++l    +++L+ v+s++P vv+++e+  + +++    ++ +r++ a+++ysa+fd+le
  TRIDC6BG028830.2 221 AQLAADRAACLELHPDETLAVNCVLFLHRLS-GDGEL----TAFLRWVRSMNPAVVTIAERQGEAGRGedddDLPRRVAAAMDFYSAVFDALE 308
                       6888889999********************7.44555....55******************977644334459******************** PP

              GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkd 364
                       a++p+ s er  vE+e+lg ei  vva  g+    r +++e W ++ ++aG++p p s++a++qa+lllr ++ s+gy  ee  g+ +lgW++
  TRIDC6BG028830.2 309 ATVPPGSAERLAVEQEILGTEIDAVVAGPGSG-GGRPRSFEAWTAAARAAGLSPWPASTFAVSQARLLLRLHYpSEGYAAEEAGGACFLGWQT 400
                       *******************************9.9*********************************************************** PP

              GRAS 365 rpLvsvSaW 373
                       r+L+svS+W
  TRIDC6BG028830.2 401 RTLMSVSSW 409
                       ********* PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
PSHALRPPPA TAADAMLDPP EPDDDAAQPP RAPVAAASPR GLVLACADLL HRGDLDGARR  60
AAGAALSGAD PRGDAADRLA HHFARALALR ADEGRSSVGP PAAVGVGVAP ASSAAHLAYN  120
KIAPFLRFAH LTANQAILEA AAGARRVHIV DLDAAHGVQW PPLLQAICDR ADAAVGPPEV  180
RITGAGPDLD VLLRTGDRLR AFASSLNLPF RFHPLLLPCT AQLAADRAAC LELHPDETLA  240
VNCVLFLHRL SGDGELTAFL RWVRSMNPAV VTIAERQGEA GRGEDDDDLP RRVAAAMDFY  300
SAVFDALEAT VPPGSAERLA VEQEILGTEI DAVVAGPGSG GGRPRSFEAW TAAARAAGLS  360
PWPASTFAVS QARLLLRLHY PSEGYAAEEA GGACFLGWQT RTLMSVSSWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.12e-70GRAS family protein