PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG029610.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 136aa    MW: 16021.4 Da    PI: 11.1393
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG029610.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS71.31.9e-2249131285374
              GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                       v   llg+ei+n+ ac  aerrerhe       r+e  GF  vpls++a  qa++  +  + +g++v  e+g+++l+W+dr+L+svSaWr
  TRIDC6BG029610.1  49 VQWWLLGEEIKNIMACDSAERRERHE-------RMEGTGFWCVPLSYYALLQARRAAQGLGCNGFKVRVEKGTFFLCWQDRALFSVSAWR 131
                       566789*******************9.......9*******************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MISILSNLSF SSSKKEIAPN GLWRRSTTTR RCSAAWRWAW RTGPWSVHVQ WWLLGEEIKN  60
IMACDSAERR ERHERMEGTG FWCVPLSYYA LLQARRAAQG LGCNGFKVRV EKGTFFLCWQ  120
DRALFSVSAW RRRRFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.14e-20GRAS family protein