PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG030770.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 297aa MW: 31834.7 Da PI: 8.3062

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG030770.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.8	6.1e-19	11	56	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+++G ++W++I r ++ gR++k+c++rw + TRIDC6BG030770.2 11 KGPWSPEEDEALRRLVERHGARNWTAIGRGIP-GRSGKSCRLRWCNQ 56 79****************************.*********985 PP
2	Myb_DNA-binding	54.8	2.2e-17	63	106	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eEd +++a+++lG++ W++Iar ++ gRt++ +k++w++ TRIDC6BG030770.2 63 RRPFTAEEDAAILRAHARLGNR-WAAIARLLP-GRTDNAVKNHWNS 106 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MGAEAECDRI KGPWSPEEDE ALRRLVERHG ARNWTAIGRG IPGRSGKSCR LRWCNQLSPQ 60 VERRPFTAEE DAAILRAHAR LGNRWAAIAR LLPGRTDNAV KNHWNSSLKR KLATATGGAA 120 WEEASDSGDS PRPCKRASPG PESPTGSDRS ELSHGSGQVF RPVPRPGGFD AISADVRPPP 180 PRQDEDPITS LSLSLPGLEH GFHHDSARSH FQELSPSPRS PSPPPAPVPQ PSSSYPFSGD 240 LVAAMQEMIR AEVCKYMSGV GLPAGCGAGA VGEACIPQLV EGVMRAAAER VGVMTRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	8e-68	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG030770.2