PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG031580.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 216aa    MW: 23323 Da    PI: 4.8232
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG031580.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.91.2e-1377121552
               AP2   5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 
                       GV + + +g+++AeIrd +    +  r++lg+f+t+e Aa a+++a+  
  TRIDC6BG031580.1  77 GVPRGP-WGKYAAEIRDSTR---SgERVWLGTFDTPEAAALAYDQAAYT 121
                       887778.**********322...35*********************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
AADDDIAPYP QQQQPQYLNF GGSSYQYDGA ASAMGMGMDM DQFSALMEAT SISPAAPSWA  60
EQHEAKKANA ESPQLIGVPR GPWGKYAAEI RDSTRSGERV WLGTFDTPEA AALAYDQAAY  120
TSRGTAAVLN FPVERVRESL RVLKLGEAAD AGKDDSPVLA LKRRHCIRKR TPKGKGQGDM  180
KKKQPAAAAA SSVLELEDLG ADYLEELLAL SEQWSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-30ERF family protein