PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG031620.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 219aa    MW: 23853.6 Da    PI: 4.9854
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG031620.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2483e-1574119452
               AP2   4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 
                        GVr+++ +g+++AeIrd +    +  r++lg+f+t+e Aa  +++a+  
  TRIDC6BG031620.1  74 IGVRRRP-WGKYAAEIRDSTR---SgERVWLGTFDTPEAAALTYDQAAYT 119
                       6******.**********322...35*********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
AAYDDIVPYA QQQHPQYLNF DGGSFQDNGT TSAMGMDMDQ FSALMEATSI STAAPSWAEQ  60
QEAKKAKAEP PQLIGVRRRP WGKYAAEIRD STRSGERVWL GTFDTPEAAA LTYDQAAYTS  120
RGPAAVLNFP VERVRESLRV LKLGEAATAG EDDSPVLALK RRHCMRKRTP KGKGQEDNMK  180
KKQPGAGAGA AAASSVLELE DLGADYLEEL LALSEQWSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.14e-43ERF family protein