PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG033300.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 342aa    MW: 36969.7 Da    PI: 8.4088
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG033300.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.47.3e-17177210134
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                       Cs C+t++TplWR+gp g+k+LCnaCG+++rk +
  TRIDC6BG033300.1 177 CSDCNTSNTPLWRSGPCGPKSLCNACGIRQRKAR 210
                       *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MTTIYMSQLS TLPLMDGDQD QGHFQAFHLP KDPPILFPFM IDNPVEHQGQ GYGDQHSRQQ  60
FFGESNQQFN DHMMMSGGSA DVFATCSPFG PTIQSIGSDM IQRSSYNSYY FEATHAGDGS  120
TSQWASAKPP VKMRIMKKAP TNDHQGGTAR KPRRRAQAHQ GDESQQLQHP MGVIRVCSDC  180
NTSNTPLWRS GPCGPKSLCN ACGIRQRKAR RAMAAAAATA ATNDGVASAS SGGVAVGAMQ  240
ASDASQAVKA TKKEKRAADL DRSLPFKKRC KMVDHPTVTT TKAVAVDATL KDQDHVVAED  300
GAMVERLSKA DPPAAFTHAF MRDEITDAAM LLMTLSCGLV RS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.11e-18GATA family protein