PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG034800.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 287aa    MW: 31918.6 Da    PI: 6.9237
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG034800.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.99.8e-101867154
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                       r++ +  rEr RRd++N+ f eL + l ++     ++ +Ka+iL  +v+ +k+L
  TRIDC6BG034800.10 18 RKVHKADRERMRRDKLNEQFMELGTTLDPD----RPRHDKATILGDTVQMLKDL 67
                       5677889********************997....799***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
RFQSQGTECK AQSSVTARKV HKADRERMRR DKLNEQFMEL GTTLDPDRPR HDKATILGDT  60
VQMLKDLTSQ VNKLKAEYSS LFEEECELTK EKNELWSEKA SLKSDVDNLN NHYQQRIQML  120
YPWTTMEPSV LIGAPPSYPF SLQVPIPAGA VTMHPQLQPC PFFQNQTLGA ISNPCTHMAY  180
SQSCHAPSDQ PSSQFSTPVP LSSSNRSHSP AQDCRSKSPS LQQASCGGRN DDFGDVATDL  240
ELKTPGSSAP SHSEITNKDS SSDLKRKEKQ CIKLINGSTL IEDRSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.14e-56bHLH family protein