PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG034800.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 340aa    MW: 37483.9 Da    PI: 6.9357
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG034800.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.61.3e-0971120154
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        r++ +  rEr RRd++N+ f eL + l ++     ++ +Ka+iL  +v+ +k+L
  TRIDC6BG034800.11  71 RKVHKADRERMRRDKLNEQFMELGTTLDPD----RPRHDKATILGDTVQMLKDL 120
                        5677889********************997....799***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
SSPLTLLPTL SHPVLARLAT GKEATTRLRP RASAPTMDPQ EDGFFYSHHG ACHADSSQGT  60
ECKAQSSVTA RKVHKADRER MRRDKLNEQF MELGTTLDPD RPRHDKATIL GDTVQMLKDL  120
TSQVNKLKAE YSSLFEEECE LTKEKNELWS EKASLKSDVD NLNNHYQQRI QMLYPWTTME  180
PSVLIGAPPS YPFSLQVPIP AGAVTMHPQL QPCPFFQNQT LGAISNPCTH MAYSQSCHAP  240
SDQPSSQFST PVPLSSSNRS HSPAQDCRSK SPSLQQASCG GRNDDFGDVA TDLELKTPGS  300
SAPSHSEITN KDSSSDLKRK EKQCIKLING STLIEDRSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.12e-55bHLH family protein