PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG034800.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 261aa    MW: 28988.4 Da    PI: 6.1582
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG034800.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.92.8e-062401254
                      HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      RRd++N+ f eL + l ++     ++ +Ka+iL  +v+ +k+L
  TRIDC6BG034800.9  2 RRDKLNEQFMELGTTLDPD----RPRHDKATILGDTVQMLKDL 40
                      ****************997....799***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MRRDKLNEQF MELGTTLDPD RPRHDKATIL GDTVQMLKDL TSQVNKLKAE YSSLFEEECE  60
LTKEKNELWS EKASLKSDVD NLNNHYQQRI QMLYPWTTME PSVLIGAPPS YPFSLQVPIP  120
AGAVTMHPQL QPCPFFQNQT LGAISNPCTH MAYSQSCHAP SDQPSSQFST PVPLSSSNRS  180
HSPAQDCRSK SPSLQQASCG GRNDDFGDVA TDLELKTPGS SAPSHSEITN KDSSSDLKRK  240
EKQCIKLING STLIEDRSSS R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.11e-50bHLH family protein