PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG035690.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 259aa    MW: 28958.2 Da    PI: 9.4296
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG035690.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix48.81.8e-15201257157
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenl 57 
                       +W+ +e++ Li++r em+e++++ k ++ lWee+s  + ++g++r+p qCk+ w +l
  TRIDC6BG035690.5 201 KWKPEEIKSLIQLRGEMNEKFQTVKGRMVLWEEISGSLLKQGITRTPAQCKSVWTSL 257
                       7*****************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MYSDGDKAFG TSTDLCIDER FRIASDGIIF VSMEIFRPKP ASPQSGLKGK FKITTRCLWL  60
DNGRLLDALY KAAHAALSSC PLNCPLSHME RMVSEILRKM VRKYSGKRPD VIVVASENTT  120
VGFSEEVINR HMSLDYEKTR PENPEREAEE SIPEVMRTTP DDATTSSNAQ GNKPKLGKIS  180
IIDKDSSTSA PAAAKSSRKN KWKPEEIKSL IQLRGEMNEK FQTVKGRMVL WEEISGSLLK  240
QGITRTPAQC KSVWTSLLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63420.17e-51Trihelix family protein