PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG037010.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 218aa    MW: 24802 Da    PI: 9.076
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG037010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.51.2e-1199140351
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                        +GV++  k+ +W A I++      +k+++lg+ gt +eAa+++++a+ 
  TRIDC6BG037010.1  99 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQDEAARLYDRAAF 140
                       79**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MVSLRRRRLL GLCSGKDSLP VDLPKPVENE KHGEVEHANV NPLSVHPLPL TRTSDVLPES  60
SNGSDSLKEE KNQYYPGKEI KRRKRHRRKQ YVDQEPCIMR GVYFKNMKWQ AAIKVDKKQI  120
HLGTVGTQDE AARLYDRAAF MCGREPNFEL SEEEKNELVK YTWDDFLAIT RNTITSKKQR  180
KVGSLRHNKA DLFIGDTEMV NGGGSSNSDD GDVDTSIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.22e-45ERF family protein