PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG037320.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 456aa MW: 50849.4 Da PI: 9.0583

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG037320.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42	2.2e-13	136	179	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +W++eE + l + ++++G ++W +a+ ++ gR++ qc+ rw+ TRIDC6BG037320.6 136 RVKWSEEENKVLTQMINKHGLKNWQMVAHAIP-GRSAPQCRQRWR 179 789***************************.*********8 PP
2	Myb_DNA-binding	38.5	2.6e-12	188	230	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +W+++E+++l++a++ +G++ W+ ++++ gRt +k++w+ TRIDC6BG037320.6 188 KEAWSEQEELRLIRAHQIYGTK-WREMVKHFP-GRTNGAIKEYWR 230 579*****************.*****.*********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
LLSPRARRQR QRASHSHPTH LFLLGPLLRI LHRGELRRSG LNPAATAFSR CFWRTRGFFP 60 AMSRIGDLMP RERSVKSTSH SRKADGNSAN VSGTPHDIAK HCHDEELGNI GGKLCKNDGH 120 SFKESCSITN SEVLTRVKWS EEENKVLTQM INKHGLKNWQ MVAHAIPGRS APQCRQRWRY 180 KIDSAINKEA WSEQEELRLI RAHQIYGTKW REMVKHFPGR TNGAIKEYWR GPMKRKLNSY 240 LSSGLLEQFP DILENLSGTQ NNSLDILKGT KVSDILNDTE GLSERNEMSS AVPRISISEV 300 SFTEVGENAD VPGGESADFM YARVASAKAP ENIIARSEQH AKTRRKLDLL SSPVELKSSS 360 HEVNSQRPLQ QREQMSPAVG GVSPSNGCHD VLPKILSECA KPVLSSTGSY QPSDVHSAGT 420 SDPCSLELDI SDLMEMSYFD NLLIFPPGSP HDGNSI

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

LLSPRARRQR QRASHSHPTH LFLLGPLLRI LHRGELRRSG LNPAATAFSR CFWRTRGFFP  60
AMSRIGDLMP RERSVKSTSH SRKADGNSAN VSGTPHDIAK HCHDEELGNI GGKLCKNDGH  120
SFKESCSITN SEVLTRVKWS EEENKVLTQM INKHGLKNWQ MVAHAIPGRS APQCRQRWRY  180
KIDSAINKEA WSEQEELRLI RAHQIYGTKW REMVKHFPGR TNGAIKEYWR GPMKRKLNSY  240
LSSGLLEQFP DILENLSGTQ NNSLDILKGT KVSDILNDTE GLSERNEMSS AVPRISISEV  300
SFTEVGENAD VPGGESADFM YARVASAKAP ENIIARSEQH AKTRRKLDLL SSPVELKSSS  360
HEVNSQRPLQ QREQMSPAVG GVSPSNGCHD VLPKILSECA KPVLSSTGSY QPSDVHSAGT  420
SDPCSLELDI SDLMEMSYFD NLLIFPPGSP HDGNSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11510.1	5e-38	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG037320.6