PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG038120.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 238aa MW: 26196.4 Da PI: 5.6759

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG038120.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.3	5.4e-23	96	216	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................................tekerrtraetrtg 61 Yn+Y+ ++GFs+++++s+k ++ge +k++fvC+k k++ +++ ++k+r++ + +tg TRIDC6BG038120.1 96 YNAYSLQMGFSIKMNSSRKDMKTGELIKQQFVCNKFRKPDVDDEGaekipvlddiveqvkddnedeaivfldddskgkkRSKKRKRDKIVQTG 188 ************************************999998899**************************98889999999* PP FAR1 62 CkaklkvkkekdgkwevtkleleHnHela 90 Ckak+ vk dg+wev+ +++eHnH+l TRIDC6BG038120.1 189 CKAKMIVKVI-DGRWEVIYFVSEHNHPLI 216 ******.**************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
PNPPIIQRVD GTATEAMETD GQSSHGGCAP GSTQVPTAVA AGSDAHTLDG TCAAGDTGGT 60 VGNGLGAEND DEAWSQPKEP YVGMRFDTLE DVKVHYNAYS LQMGFSIKMN SSRKDMKTGE 120 LIKQQFVCNK FRKPDVDDEG AEKIPVLDDI VEQVKDDNED EAIVFLDDDS KGKKRSKKRK 180 RDKIVQTGCK AKMIVKVIDG RWEVIYFVSE HNHPLIDKPC LTKYLRSHQG IPPKERAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	4e-12	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG038120.1