PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG038730.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 451aa MW: 49794.2 Da PI: 4.6478

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG038730.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	75.3	1.4e-23	12	114	35	128
NAM 35 kevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........tksgyWkatgkdkevlskkgelvglkktLvfykgrapkge. 117 ++++i++++P++Lp ++++ ++++fF++ +++y g+rk+r ++ +W++tgk+k+v++ +g +g kk+Lv+ykg++ g+ TRIDC6BG038730.1 12 NDAGICYSHPENLP-GTNKDGSSVHFFHSISNAYGCGQRKRRRisnsdrttsDEHVRWHKTGKSKPVYD-NGVMKGWKKILVLYKGSQTGGKp 102 4678********.556678899*************9657888865444889********.999*******998776655 PP NAM 118 .ktdWvmheyrl 128 ktdWvmh+y+l TRIDC6BG038730.1 103 dKTDWVMHQYHL 114 5*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MFIDEFIPTV ENDAGICYSH PENLPGTNKD GSSVHFFHSI SNAYGCGQRK RRRISNSDRT 60 TSDEHVRWHK TGKSKPVYDN GVMKGWKKIL VLYKGSQTGG KPDKTDWVMH QYHLGVEENE 120 KVGEFVVSKI FYQLKPRQVD KSEAEMANEE SNAFTSSICP KTPMTKIPPC RPKNSPCETE 180 QNDPGQEEET VSLAENAKNP AWCALSSQPV EVALEAGTCS LDKSLHHHEV LDSSDLENST 240 FDRPILSQLM NETLNKNLCA LHGLPDLHNV NLGTAPTDLQ ITKGENVSLA DDAENTACCS 300 LASQDVEVTS QAGTSLVESL LHHEVSDLHN ANLGTPRDLQ ITKEESVSLV DEAEKWCGLA 360 SQAVDVASHA GTSLDESLRC HEVLDSFDHE KSLTFDRPIY SQGRDGGLEN NLYLLNGLPD 420 LQGVDLGTPI DDLQGLQFYS QESLGSWLDR M

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MFIDEFIPTV ENDAGICYSH PENLPGTNKD GSSVHFFHSI SNAYGCGQRK RRRISNSDRT  60
TSDEHVRWHK TGKSKPVYDN GVMKGWKKIL VLYKGSQTGG KPDKTDWVMH QYHLGVEENE  120
KVGEFVVSKI FYQLKPRQVD KSEAEMANEE SNAFTSSICP KTPMTKIPPC RPKNSPCETE  180
QNDPGQEEET VSLAENAKNP AWCALSSQPV EVALEAGTCS LDKSLHHHEV LDSSDLENST  240
FDRPILSQLM NETLNKNLCA LHGLPDLHNV NLGTAPTDLQ ITKGENVSLA DDAENTACCS  300
LASQDVEVTS QAGTSLVESL LHHEVSDLHN ANLGTPRDLQ ITKEESVSLV DEAEKWCGLA  360
SQAVDVASHA GTSLDESLRC HEVLDSFDHE KSLTFDRPIY SQGRDGGLEN NLYLLNGLPD  420
LQGVDLGTPI DDLQGLQFYS QESLGSWLDR M

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	49	53	RKRRR
2	49	75	RKRRRISNSDRTTSDEHVRWHKTGKSK
3	50	54	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	3e-51	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG038730.1