PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG038730.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 536aa MW: 59093.9 Da PI: 4.9384

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG038730.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	97.7	1.7e-30	56	199	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra...... 77 lp+G++F+P+d el+ e+L++k+ + +e+i++v+ i++++P++Lp ++++ ++++fF++ +++y g+rk+r TRIDC6BG038730.2 56 LPAGVKFDPSDLELL-EHLEQKIGVGGskphmfI--DEFIPTVEndagICYSHPENLP-GTNKDGSSVHFFHSISNAYGCGQRKRRRisnsdr 144 799**********.99876554555332..333444422344******.556678899*************96578888 PP NAM 78 ...tksgyWkatgkdkevlskkgelvglkktLvfykgrapkge..ktdWvmheyrl 128 ++ +W++tgk+k+v++ +g +g kk+Lv+ykg++ g+ ktdWvmh+y+l TRIDC6BG038730.2 145 ttsDEHVRWHKTGKSKPVYD-NGVMKGWKKILVLYKGSQTGGKpdKTDWVMHQYHL 199 65444889********.999*******9987766555*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MARSWLITCR GVAKKVRNAH CSNRQISEVG AEACRECPNC KHIIDNSDVA IQWPGLPAGV 60 KFDPSDLELL EHLEQKIGVG GSKPHMFIDE FIPTVENDAG ICYSHPENLP GTNKDGSSVH 120 FFHSISNAYG CGQRKRRRIS NSDRTTSDEH VRWHKTGKSK PVYDNGVMKG WKKILVLYKG 180 SQTGGKPDKT DWVMHQYHLG VEENEKVGEF VVSKIFYQLK PRQVDKSEAE MANEESNAFT 240 SSICPKTPMT KIPPCRPKNS PCETEQNDPG QEEETVSLAE NAKNPAWCAL SSQPVEVALE 300 AGTCSLDKSL HHHEVLDSSD LENSTFDRPI LSQLMNETLN KNLCALHGLP DLHNVNLGTA 360 PTDLQITKGE NVSLADDAEN TACCSLASQD VEVTSQAGTS LVESLLHHEV SDLHNANLGT 420 PRDLQITKEE SVSLVDEAEK WCGLASQAVD VASHAGTSLD ESLRCHEVLD SFDHEKSLTF 480 DRPIYSQGRD GGLENNLYLL NGLPDLQGVD LGTPIDDLQG LQFYSQESLG SWLDRM

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MARSWLITCR GVAKKVRNAH CSNRQISEVG AEACRECPNC KHIIDNSDVA IQWPGLPAGV  60
KFDPSDLELL EHLEQKIGVG GSKPHMFIDE FIPTVENDAG ICYSHPENLP GTNKDGSSVH  120
FFHSISNAYG CGQRKRRRIS NSDRTTSDEH VRWHKTGKSK PVYDNGVMKG WKKILVLYKG  180
SQTGGKPDKT DWVMHQYHLG VEENEKVGEF VVSKIFYQLK PRQVDKSEAE MANEESNAFT  240
SSICPKTPMT KIPPCRPKNS PCETEQNDPG QEEETVSLAE NAKNPAWCAL SSQPVEVALE  300
AGTCSLDKSL HHHEVLDSSD LENSTFDRPI LSQLMNETLN KNLCALHGLP DLHNVNLGTA  360
PTDLQITKGE NVSLADDAEN TACCSLASQD VEVTSQAGTS LVESLLHHEV SDLHNANLGT  420
PRDLQITKEE SVSLVDEAEK WCGLASQAVD VASHAGTSLD ESLRCHEVLD SFDHEKSLTF  480
DRPIYSQGRD GGLENNLYLL NGLPDLQGVD LGTPIDDLQG LQFYSQESLG SWLDRM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	138	RKRRR
2	134	160	RKRRRISNSDRTTSDEHVRWHKTGKSK
3	135	139	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	5e-84	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG038730.2