PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG038730.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 270aa    MW: 30323.3 Da    PI: 8.0673
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG038730.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM99.83.8e-31551981128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra...... 77 
                       lp+G++F+P+d el+ e+L++k+          +  +e+i++v+    i++++P++Lp  ++++ ++++fF++ +++y  g+rk+r       
  TRIDC6BG038730.5  55 LPAGVKFDPSDLELL-EHLEQKIGVGGskphmfI--DEFIPTVEndagICYSHPENLP-GTNKDGSSVHFFHSISNAYGCGQRKRRRisnsdr 143
                       799************.99****876554555332..333444422344**********.556678899*****************96578888 PP

               NAM  78 ...tksgyWkatgkdkevlskkgelvglkktLvfykgrapkge..ktdWvmheyrl 128
                           ++ +W++tgk+k+v++ +g  +g kk+Lv+ykg++  g+  ktdWvmh+y+l
  TRIDC6BG038730.5 144 ttsDEHVRWHKTGKSKPVYD-NGVMKGWKKILVLYKGSQTGGKpdKTDWVMHQYHL 198
                       65444889************.999***********9987766555*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
CRSWLITCRG VAKKVRNAHC SNRQISEVGA EACRECPNCK HIIDNSDVAI QWPGLPAGVK  60
FDPSDLELLE HLEQKIGVGG SKPHMFIDEF IPTVENDAGI CYSHPENLPG TNKDGSSVHF  120
FHSISNAYGC GQRKRRRISN SDRTTSDEHV RWHKTGKSKP VYDNGVMKGW KKILVLYKGS  180
QTGGKPDKTD WVMHQYHLGV EENEKVGEFV VSKIFYQLKP RQVDKSEAEM ANEESNAFTS  240
SICPKTPMTK IPPCRPKNSP CETEQNDPVQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133137RKRRR
2133159RKRRRISNSDRTTSDEHVRWHKTGKSK
3134138KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.14e-84NAC family protein