PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG039900.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

DBB

Protein Properties

Length: 257aa MW: 27743.3 Da PI: 4.8885

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG039900.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.1	2.7e-06	4	46	5	41
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+ ++ ++ C ++ lC+ C + +H H++ p TRIDC6BG039900.3 4 QCDSCGVAAATVVCCADEAALCARCDVDIHAAnklaskHQRLP 46 7***999*******************6678888888877 PP
2	zf-B_box	27.1	8.5e-09	53	85	2	34
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeH 34 + ++C+ ++ek + +fC +++ l+C+dC + +H TRIDC6BG039900.3 53 KLPRCDICQEKAAFIFCVEDRALFCRDCDEPIH 85 5789**************************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MKIQCDSCGV AAATVVCCAD EAALCARCDV DIHAANKLAS KHQRLPLDAL GAKLPRCDIC 60 QEKAAFIFCV EDRALFCRDC DEPIHVPGTL SGNHQRYLAT GIRVGLGPVS ACAAGDHGAS 120 HDADHPAPPK LACEPQPPAQ PAASAQQVPS PPQFLPQDWG VDELLQFSDY ESSDKVLHKD 180 SALGFKELEW FTADMELFHD HAPKGGRATM EVPEFFASQA ADDAAYYRPS RVAATAGLRQ 240 SKKARVEIPD DEDFFIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	7e-54	DBB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG039900.3