PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG040150.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 812aa    MW: 91746.9 Da    PI: 8.9454
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG040150.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR155.32.2e-1753136190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY++YA++vGF v++++s+ s ++g++   +++C k g+++ e k      r+r+++ t+C a+++vk++ d+  +v+  +l+HnH+++
  TRIDC6BG040150.2  53 RFYRRYARRVGFGVSVRRSSFS-QEGTCLYLELMCCKGGRPRYEPKF-----RKRTSSTTNCPARIRVKLWGDKLLHVELANLDHNHPVS 136
                       5*****************9999.6677****************9988.....99999******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 812 aa     Download sequence    
METEGAAHPP KNPRRPRRRD LNALDPYLEE SDGQDIGIPE VGMVFNNHME VNRFYRRYAR  60
RVGFGVSVRR SSFSQEGTCL YLELMCCKGG RPRYEPKFRK RTSSTTNCPA RIRVKLWGDK  120
LLHVELANLD HNHPVSPAMA RFLNSYKQLS GPAKRRLRMG GPGAMPVEEP SKMPVDKLGA  180
LEELLFGESK NHSFVERGRL KLQPGDSEAL RLFFTRMQAK NANFFNVIDL DDEGCVRNVF  240
WADAWSRAMY EYYNDTITLD TSYVVSKHDM PLVTFLGVNH HGQSVLLGCG LLSDETAETY  300
TWLFKAWVAC MSGNLPKAII TDQCRGIQSA VAEVVPGVRH RICLHQIMKK AADQLSGLSE  360
YKAISKALQK AAYDSLTVDE FEGEWSTLIT YNGLQGHDWL RSLYECRFSW VPIFLKDAFW  420
AGMSATQRSE TITPFFEGYV DLKTSLKQFL GKYEMILQSK YEKEAQADFE TFHKQRPPVS  480
KFYMEEQLSK VYTHNIFKKF QDEIEAIMYC HVSLMNGDGP ISTFNVKECI FLEDGKRTMS  540
KIFAVTYNTE EKDITCICGG FQFSGILCRH SLSVLKFQQV REVPSQYVLD RWKKDFRQLH  600
VMGRLSSDVV PDNRVDRYDY LSMRCLQLVD SAVLSDKYRL ALRLVREVEK FLLNSNTHDD  660
TQPRIKSRIP KVKPNTVTGQ NLVNVVTDNG SGPKGPEASA SAQASQIQKG VAEKAVVPAG  720
YIGVPANVQQ FMGNQAAMRP SIVYMVPSGV DPQAFGNGVL MPVMYQQMFQ IPQQPNGAAQ  780
DTLANGKRKR PRGQKPTETS HQSNGTSGPA AG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11419RRPRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.11e-134FAR1 family protein