PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG040150.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 805aa MW: 91057.1 Da PI: 9.0905

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG040150.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.3	2.2e-17	46	129	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA++vGF v++++s+ s ++g++ +++C k g+++ e k r+r+++ t+C a+++vk++ d+ +v+ +l+HnH+++ TRIDC6BG040150.7 46 RFYRRYARRVGFGVSVRRSSFS-QEGTCLYLELMCCKGGRPRYEPKF-----RKRTSSTTNCPARIRVKLWGDKLLHVELANLDHNHPVS 129 5***************9999.6677************9988.....99999****************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 805 aa Download sequence
HPPKNPRRPR RRDLNALDPY LEESDGQDIG IPEVGMVFNN HMEVNRFYRR YARRVGFGVS 60 VRRSSFSQEG TCLYLELMCC KGGRPRYEPK FRKRTSSTTN CPARIRVKLW GDKLLHVELA 120 NLDHNHPVSP AMARFLNSYK QLSGPAKRRL RMGGPGAMPV EEPSKMPVDK LGALEELLFG 180 ESKNHSFVER GRLKLQPGDS EALRLFFTRM QAKNANFFNV IDLDDEGCVR NVFWADAWSR 240 AMYEYYNDTI TLDTSYVVSK HDMPLVTFLG VNHHGQSVLL GCGLLSDETA ETYTWLFKAW 300 VACMSGNLPK AIITDQCRGI QSAVAEVVPG VRHRICLHQI MKKAADQLSG LSEYKAISKA 360 LQKAAYDSLT VDEFEGEWST LITYNGLQGH DWLRSLYECR FSWVPIFLKD AFWAGMSATQ 420 RSETITPFFE GYVDLKTSLK QFLGKYEMIL QSKYEKEAQA DFETFHKQRP PVSKFYMEEQ 480 LSKVYTHNIF KKFQDEIEAI MYCHVSLMNG DGPISTFNVK ECIFLEDGKR TMSKIFAVTY 540 NTEEKDITCI CGGFQFSGIL CRHSLSVLKF QQVREVPSQY VLDRWKKDFR QLHVMGRLSS 600 DVVPDNRVDR YDYLSMRCLQ LVDSAVLSDK YRLALRLVRE VEKFLLNSNT HDDTQPRIKS 660 RIPKVKPNTV TGQNLVNVVT DNGSGPKGPE ASASAQASQI QKGVAEKAVV PAGYIGVPAN 720 VQQFMGNQAA MRPSIVYMVP SGVDPQAFGN GVLMPVMYQQ MFQIPQQPNG AAQDTLANGK 780 RKRPRGQKPT ETSHQSNGTS GPAAG

Sequence ? help Back to Top

Protein Sequence Length: 805 aa Download sequence

HPPKNPRRPR RRDLNALDPY LEESDGQDIG IPEVGMVFNN HMEVNRFYRR YARRVGFGVS  60
VRRSSFSQEG TCLYLELMCC KGGRPRYEPK FRKRTSSTTN CPARIRVKLW GDKLLHVELA  120
NLDHNHPVSP AMARFLNSYK QLSGPAKRRL RMGGPGAMPV EEPSKMPVDK LGALEELLFG  180
ESKNHSFVER GRLKLQPGDS EALRLFFTRM QAKNANFFNV IDLDDEGCVR NVFWADAWSR  240
AMYEYYNDTI TLDTSYVVSK HDMPLVTFLG VNHHGQSVLL GCGLLSDETA ETYTWLFKAW  300
VACMSGNLPK AIITDQCRGI QSAVAEVVPG VRHRICLHQI MKKAADQLSG LSEYKAISKA  360
LQKAAYDSLT VDEFEGEWST LITYNGLQGH DWLRSLYECR FSWVPIFLKD AFWAGMSATQ  420
RSETITPFFE GYVDLKTSLK QFLGKYEMIL QSKYEKEAQA DFETFHKQRP PVSKFYMEEQ  480
LSKVYTHNIF KKFQDEIEAI MYCHVSLMNG DGPISTFNVK ECIFLEDGKR TMSKIFAVTY  540
NTEEKDITCI CGGFQFSGIL CRHSLSVLKF QQVREVPSQY VLDRWKKDFR QLHVMGRLSS  600
DVVPDNRVDR YDYLSMRCLQ LVDSAVLSDK YRLALRLVRE VEKFLLNSNT HDDTQPRIKS  660
RIPKVKPNTV TGQNLVNVVT DNGSGPKGPE ASASAQASQI QKGVAEKAVV PAGYIGVPAN  720
VQQFMGNQAA MRPSIVYMVP SGVDPQAFGN GVLMPVMYQQ MFQIPQQPNG AAQDTLANGK  780
RKRPRGQKPT ETSHQSNGTS GPAAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	7	12	RRPRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-134	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG040150.7