PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG040150.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 807aa MW: 91200.5 Da PI: 8.6385

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG040150.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.3	2.2e-17	48	131	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA++vGF v++++s+ s ++g++ +++C k g+++ e k r+r+++ t+C a+++vk++ d+ +v+ +l+HnH+++ TRIDC6BG040150.9 48 RFYRRYARRVGFGVSVRRSSFS-QEGTCLYLELMCCKGGRPRYEPKF-----RKRTSSTTNCPARIRVKLWGDKLLHVELANLDHNHPVS 131 5***************9999.6677************9988.....99999****************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 807 aa Download sequence
MELLRIQYLV SDLAMMVNPD PYLEESDGQD IGIPEVGMVF NNHMEVNRFY RRYARRVGFG 60 VSVRRSSFSQ EGTCLYLELM CCKGGRPRYE PKFRKRTSST TNCPARIRVK LWGDKLLHVE 120 LANLDHNHPV SPAMARFLNS YKQLSGPAKR RLRMGGPGAM PVEEPSKMPV DKLGALEELL 180 FGESKNHSFV ERGRLKLQPG DSEALRLFFT RMQAKNANFF NVIDLDDEGC VRNVFWADAW 240 SRAMYEYYND TITLDTSYVV SKHDMPLVTF LGVNHHGQSV LLGCGLLSDE TAETYTWLFK 300 AWVACMSGNL PKAIITDQCR GIQSAVAEVV PGVRHRICLH QIMKKAADQL SGLSEYKAIS 360 KALQKAAYDS LTVDEFEGEW STLITYNGLQ GHDWLRSLYE CRFSWVPIFL KDAFWAGMSA 420 TQRSETITPF FEGYVDLKTS LKQFLGKYEM ILQSKYEKEA QADFETFHKQ RPPVSKFYME 480 EQLSKVYTHN IFKKFQDEIE AIMYCHVSLM NGDGPISTFN VKECIFLEDG KRTMSKIFAV 540 TYNTEEKDIT CICGGFQFSG ILCRHSLSVL KFQQVREVPS QYVLDRWKKD FRQLHVMGRL 600 SSDVVPDNRV DRYDYLSMRC LQLVDSAVLS DKYRLALRLV REVEKFLLNS NTHDDTQPRI 660 KSRIPKVKPN TVTGQNLVNV VTDNGSGPKG PEASASAQAS QIQKGVAEKA VVPAGYIGVP 720 ANVQQFMGNQ AAMRPSIVYM VPSGVDPQAF GNGVLMPVMY QQMFQIPQQP NGAAQDTLAN 780 GKRKRPRGQK PTETSHQSNG TSGPAAG

Sequence ? help Back to Top

Protein Sequence Length: 807 aa Download sequence

MELLRIQYLV SDLAMMVNPD PYLEESDGQD IGIPEVGMVF NNHMEVNRFY RRYARRVGFG  60
VSVRRSSFSQ EGTCLYLELM CCKGGRPRYE PKFRKRTSST TNCPARIRVK LWGDKLLHVE  120
LANLDHNHPV SPAMARFLNS YKQLSGPAKR RLRMGGPGAM PVEEPSKMPV DKLGALEELL  180
FGESKNHSFV ERGRLKLQPG DSEALRLFFT RMQAKNANFF NVIDLDDEGC VRNVFWADAW  240
SRAMYEYYND TITLDTSYVV SKHDMPLVTF LGVNHHGQSV LLGCGLLSDE TAETYTWLFK  300
AWVACMSGNL PKAIITDQCR GIQSAVAEVV PGVRHRICLH QIMKKAADQL SGLSEYKAIS  360
KALQKAAYDS LTVDEFEGEW STLITYNGLQ GHDWLRSLYE CRFSWVPIFL KDAFWAGMSA  420
TQRSETITPF FEGYVDLKTS LKQFLGKYEM ILQSKYEKEA QADFETFHKQ RPPVSKFYME  480
EQLSKVYTHN IFKKFQDEIE AIMYCHVSLM NGDGPISTFN VKECIFLEDG KRTMSKIFAV  540
TYNTEEKDIT CICGGFQFSG ILCRHSLSVL KFQQVREVPS QYVLDRWKKD FRQLHVMGRL  600
SSDVVPDNRV DRYDYLSMRC LQLVDSAVLS DKYRLALRLV REVEKFLLNS NTHDDTQPRI  660
KSRIPKVKPN TVTGQNLVNV VTDNGSGPKG PEASASAQAS QIQKGVAEKA VVPAGYIGVP  720
ANVQQFMGNQ AAMRPSIVYM VPSGVDPQAF GNGVLMPVMY QQMFQIPQQP NGAAQDTLAN  780
GKRKRPRGQK PTETSHQSNG TSGPAAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-134	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG040150.9