PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG043320.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 116aa MW: 13063.9 Da PI: 10.8084

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG043320.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.5	8.3e-10	50	87	1	36
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS- CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRt 36 +g W++eEd++l d++ ++G g+W++ +++ g +R+ TRIDC6BG043320.1 50 KGLWSPEEDQKLRDYILRHGHGCWSALPAKAGkaDHRS 87 678**************************999665555 PP

Sequence ? help Back to Top
Protein Sequence Length: 116 aa Download sequence
PSQPRLEPEA SATAAASCTP LRGFVPRRSS ACKQAMGCKA CDKPRPSYRK GLWSPEEDQK 60 LRDYILRHGH GCWSALPAKA GKADHRSRIR ISTSTKRGII EENSVRWVDD RVLRHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48920.1	7e-14	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG043320.1