PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG043320.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 295aa    MW: 31562 Da    PI: 6.5046
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG043320.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.91.5e-151562148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g W++eEd++l d++ ++G g+W++ +++ g+ R +k+c++rw +yl
  TRIDC6BG043320.2 15 KGLWSPEEDQKLRDYILRHGHGCWSALPAKAGLQRNGKSCRLRWINYL 62
                      678*******************************************97 PP
2Myb_DNA-binding53.74.6e-1769113248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       g +++eE+e    +++ lG++ W++Iar+++ gRt++++k++w++yl
  TRIDC6BG043320.2  69 GMFSPEEEETVMSLHAALGNK-WSRIARHLP-GRTDNEVKNYWNSYL 113
                       569******************.*********.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MGCKACDKPR PSYRKGLWSP EEDQKLRDYI LRHGHGCWSA LPAKAGLQRN GKSCRLRWIN  60
YLRPGLKHGM FSPEEEETVM SLHAALGNKW SRIARHLPGR TDNEVKNYWN SYLKKRVEGG  120
KEAPNSPNRH AASSAAESDG SQSQSTGEVG AAQERAGRPS NSGSSEPPHE SSSADSSCLT  180
VTEPPACRAH APVAPKVMFA DWLNMDYIGG QVAAAAPGPE AAGVVGAGGG DHRQVMSQGS  240
AQVDGPPGVE DPLHGGFGDS GTCWEFLEQL DSMDQMQAGG GFCDLLSVTE FFGLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52260.15e-57MYB family protein