PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG043350.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 226aa    MW: 24260.3 Da    PI: 7.1296
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG043350.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.59.7e-163580148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg++T+eE++ +v+++   G++ W+ Ia+ ++ gRt++++k++w+++l
  TRIDC6BG043350.4 35 RGPFTAEEQKSIVQLHGIVGNK-WSMIAAQLP-GRTDNEIKNYWNTHL 80
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
PTMTLNWVAL PAELNRCGKS CRLRWTNYLR PDIKRGPFTA EEQKSIVQLH GIVGNKWSMI  60
AAQLPGRTDN EIKNYWNTHL KKQLRRMGLD EPPPGPTAGC PAARHMAQWE TARLEAEARL  120
SLLSSSGAAA TATTSGSASS SSTAAAGAAV AEHAKPADVF LRLWNSDIGS SFRKAAAPVS  180
VKEEEAVVPG DDSSAASNEM DAAAAEYQMF LDFAGEELGL FHGRHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.13e-46MYB family protein