PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG043490.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 354aa MW: 40178.9 Da PI: 7.2071

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG043490.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180	6e-56	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 +ppGfrFhPtdeelv++yL+kkv++kk++l +vik+vd+yk+ePwdL+ k k+ e+++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk TRIDC6BG043490.1 7 VPPGFRFHPTDEELVDYYLRKKVASKKIDL-DVIKDVDLYKIEPWDLQdKcKIGMeEQNDWYFFSHKDKKYPTGTRTNRATSAGFWKATGRDK 98 69**************************.9***********943433333556****************************** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++++ ++ lvg++ktLvfykgrap+g+k+dW+mheyrle TRIDC6BG043490.1 99 PIYT-NNCLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 .999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MDTFSHVPPG FRFHPTDEEL VDYYLRKKVA SKKIDLDVIK DVDLYKIEPW DLQDKCKIGM 60 EEQNDWYFFS HKDKKYPTGT RTNRATSAGF WKATGRDKPI YTNNCLVGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETNEN GATPEEGWVV CRVFKKRVAT VRRMADMNSP CWFDDHGAGG 180 GFMPDLDSPR QLGYQHQNLA AYHSQPQQQQ HLYHCKPELE YHHLLPQEAF MQQLPLLESP 240 KPTAYIGHGS SSSVPSSISN HPLAHDGASR FAAHQPPMDH ALYTGDSSAT DWRLLDKFVA 300 SQLFSHDGTN PKEQATHPNP AMQVFQVENK HDQALDYAST SAGGSGGGSA HLWK

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MDTFSHVPPG FRFHPTDEEL VDYYLRKKVA SKKIDLDVIK DVDLYKIEPW DLQDKCKIGM  60
EEQNDWYFFS HKDKKYPTGT RTNRATSAGF WKATGRDKPI YTNNCLVGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETNEN GATPEEGWVV CRVFKKRVAT VRRMADMNSP CWFDDHGAGG  180
GFMPDLDSPR QLGYQHQNLA AYHSQPQQQQ HLYHCKPELE YHHLLPQEAF MQQLPLLESP  240
KPTAYIGHGS SSSVPSSISN HPLAHDGASR FAAHQPPMDH ALYTGDSSAT DWRLLDKFVA  300
SQLFSHDGTN PKEQATHPNP AMQVFQVENK HDQALDYAST SAGGSGGGSA HLWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-104	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG043490.1