PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG043490.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 275aa    MW: 30815.8 Da    PI: 9.5694
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG043490.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM180.83.4e-5671361129
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                       +ppGfrFhPtdeelv++yL+kkv++kk++l +vik+vd+yk+ePwdL+ k k+   e+++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk
  TRIDC6BG043490.3   7 VPPGFRFHPTDEELVDYYLRKKVASKKIDL-DVIKDVDLYKIEPWDLQdKcKIGMeEQNDWYFFSHKDKKYPTGTRTNRATSAGFWKATGRDK 98 
                       69****************************.9***************943433333556********************************** PP

               NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                       ++++ ++ lvg++ktLvfykgrap+g+k+dW+mheyrle
  TRIDC6BG043490.3  99 PIYT-NNCLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136
                       ****.999*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MDTFSHVPPG FRFHPTDEEL VDYYLRKKVA SKKIDLDVIK DVDLYKIEPW DLQDKCKIGM  60
EEQNDWYFFS HKDKKYPTGT RTNRATSAGF WKATGRDKPI YTNNCLVGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETNEN GATPHGYCWF DPSGGRMGGL PGVQEASRNG AEDGRYELAL  180
LVRRPWRWRW VHAGSRLAEA ARVPAPELGG VPQPAAAAAA SVPLQARAGV PSPPAAGGLH  240
ATASSSGEPQ AYSLHWPRQQ QQRTIVNQQP PPCAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.15e-81NAC family protein