PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG043710.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 403aa    MW: 42622.1 Da    PI: 7.7377
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG043710.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.22.6e-19320354135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       Cs+Cg+ kTp+WR gp+g ktLCnaCG+++++ +l
  TRIDC6BG043710.2 320 CSHCGVQKTPQWRAGPEGAKTLCNACGVRFKSGRL 354
                       *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
THQTLISSAP AAAAFSSAPH LLHASLPTLS PSYSSAAASA MSSSFAHHHG SLQAERMSAL  60
RSSLRPCEAA EEVAAAVVAG PAPWGAGLLG DGFSVEELLD LEELCEVDKE GGFLCETAPA  120
AEEDEKCSDS HGSSAVSYEL MPLIPPEMDL PAHDAEELEW VSRIMDDSQA ELPPPPQLPA  180
PAAWPPQHRQ PQESTVPAVD PMRTPTICAL STEALVPVRS KKRSKRSRGT TVWSLSGASI  240
SDSASSSATS SSCSSSASLS SFFLMDSPTF NLLDEPPRTK SKSKKSKHKA KKRGRKPKSH  300
LPPQLSGGAA SPPGQGDRRC SHCGVQKTPQ WRAGPEGAKT LCNACGVRFK SGRLLPEYRP  360
ACSPTFVGNV HSNSHRKVLE MRRKKDPVPV VMEAAAAPAV ASF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.24e-38GATA family protein