PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG043710.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 201aa    MW: 21447.6 Da    PI: 11.3618
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG043710.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.69.7e-20118152135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       Cs+Cg+ kTp+WR gp+g ktLCnaCG+++++ +l
  TRIDC6BG043710.4 118 CSHCGVQKTPQWRAGPEGAKTLCNACGVRFKSGRL 152
                       *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
RTPTICALST EALVPVRSKK RSKRSRGTTV WSLSGASISD SASSSATSSS CSSSASLSSF  60
FLMDSPTFNL LDEPPRTKSK SKKSKHKAKK RGRKPKSHLP PQLSGGAASP PGQGDRRCSH  120
CGVQKTPQWR AGPEGAKTLC NACGVRFKSG RLLPEYRPAC SPTFVGNVHS NSHRKVLEMR  180
RKKDPVPVVM EAAAAPAVAS F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.29e-40GATA family protein