PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG045110.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 259aa    MW: 28166.4 Da    PI: 7.5372
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG045110.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS185.63.4e-5718258123374
              GRAS 123 lQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp.gEalaVnlvlql 210
                       +QW+++lq+La R+       p l++T+++s +s++  el+ t+++L++fA+ lg+pfefn++   +l+++++ eL   + +E +aV+l +  
  TRIDC6BG045110.1  18 GQWASFLQELAHRRgtggVALPLLKLTAFVSDASHHPLELHLTQDNLTQFAADLGIPFEFNAV---SLDAFSPAELISPTgDEIVAVSLPVGC 107
                       7************976544599****************************************8...99********666689********977 PP

              GRAS 211 hrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacega 303
                               +l+     +L+lvk+l Pk+vv ++  ad+ + +F ++fl++++ ++ l+dsl+a  + +++ + k+E++l++++++++v  + +
  TRIDC6BG045110.1 108 SARA---PPLAV----ILRLVKQLGPKIVVAMDYGADRADLPFSQHFLHCFQSCMFLLDSLDAA-GIDADSACKIEKFLIQPRVEDAVLGRRK 192
                       7665...55555....*********************************************888.7899*******************98777 PP

              GRAS 304 errerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                              ++ +Wr+ + +aGF+pvpls+ a++qa++ll++v+++g++ve++  +l+l+W++ +LvsvSaWr
  TRIDC6BG045110.1 193 T-----DKAVSWRNVFAAAGFTPVPLSNLAEAQADCLLKRVQVRGFHVEKRGVALTLYWQRGELVSVSAWR 258
                       6.....7889************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
PASPHRSTSP SSWRPTSGQW ASFLQELAHR RGTGGVALPL LKLTAFVSDA SHHPLELHLT  60
QDNLTQFAAD LGIPFEFNAV SLDAFSPAEL ISPTGDEIVA VSLPVGCSAR APPLAVILRL  120
VKQLGPKIVV AMDYGADRAD LPFSQHFLHC FQSCMFLLDS LDAAGIDADS ACKIEKFLIQ  180
PRVEDAVLGR RKTDKAVSWR NVFAAAGFTP VPLSNLAEAQ ADCLLKRVQV RGFHVEKRGV  240
ALTLYWQRGE LVSVSAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.16e-63GRAS family protein