PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG045300.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 314aa MW: 33126.1 Da PI: 7.2104

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG045300.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.1	6.6e-05	5	26	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ C ++F ++ L H+r+H TRIDC6BG045300.1 5 TCKLCFRRFASPRALAGHMRSH 26 6********************9 PP
2	zf-C2H2	10.6	0.0018	239	260	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +Cp+C ++F + L H r+H TRIDC6BG045300.1 239 ECPYCYRVFASGQALGGHKRSH 260 5*****************9999 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MAKNTCKLCF RRFASPRALA GHMRSHSVRN LAAKQQISSA SSASTSFTAA ADDDVSFKKP 60 LPIYALRENP KRSLRVTDVA FSDRESEAES TPPHPKRAHA AAAGAETEPL SSVSDAATPE 120 EDVALSLMML SRDSWPSMGR GDGDGDYSDD GSDGGYTLPA PDPAPVEKRT RFQCSACKKV 180 FRSYQALGGH RASHVRGGRG GCCAPPVAPP PPPPQPLAPL PLMEREGDED IDGKGSPREC 240 PYCYRVFASG QALGGHKRSH VCSAAASAAQ AHAAAAPPDP IKAFGMIDLN IALPFEDVEL 300 SAVSDPRFSS NPGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02030.1	9e-30	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG045300.1