PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG045300.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 108aa MW: 11201.6 Da PI: 4.7443

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG045300.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.00038	33	54	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +Cp+C ++F + L H r+H TRIDC6BG045300.2 33 ECPYCYRVFASGQALGGHKRSH 54 5******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 108 aa Download sequence
VAPPPPPPQP LAPLPLMERE GDEDIDGKGS PRECPYCYRV FASGQALGGH KRSHVCSAAA 60 SAAQAHAAAA PPDPIKAFGM IDLNIALPFE DVELSAVSDP RFSSNPGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	3e-11	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG045300.2