PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG045540.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 248aa    MW: 26302.8 Da    PI: 5.5908
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG045540.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-1881131155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr+++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+ +++g
  TRIDC6BG045540.3  81 PSYRGVRRRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAAVAIKG 131
                       57*****887.**********843...6*********************998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MESDTIHAPA TSSSSSYSSD STAINGVHDV SKSEPKHLKR KRQTATSPAA PGTGSQEAEA  60
RAEESSSCTA AADERTAGRH PSYRGVRRRS WGKWVSEIRE PRKKSRIWLG TFPTAEMAAR  120
AHDVAAVAIK GRRAHLNFPH LADALPRPAS TSPADIQAAA ASAAAQCESS SSVAETTETP  180
TTSTETSAAS SGTAGSVEEN ALFDLPDLLL DLRDGLWCSP TWATAADDYD GGEAALHEPL  240
LWVEQCWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-27ERF family protein