PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG045560.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 247aa    MW: 25727.4 Da    PI: 6.5154
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG045560.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-1866115255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr ++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  TRIDC6BG045560.2  66 TYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFATAEMAARAHDVAALAIKG 115
                       69****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
SRSSPPQQLT PPPQYQSAMG ATEDSSSGSE TTTSSSVEAL ASPPSPTATT ASSKKKRPRN  60
DGRHPTYRGV RMRSWGKWVS EIREPRKKSR IWLGTFATAE MAARAHDVAA LAIKGRAAHL  120
NFPDLAHELP RPATAAPKDV QAAAALAASA DFPASATAAA NAGAKNPDGP EHSGASASAS  180
ASASASASPP PDTAEDALFD LPDLLFDLRH GPPSCQLSCA SSWDDDVAFA GPGAGVFRLE  240
EPLQWEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.16e-39ERF family protein