PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG046000.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 250aa MW: 28969.1 Da PI: 9.2171

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG046000.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	38.3	4.5e-12	11	50	1	40
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegk 40 +fYn+YAk +GFs+r+ +++k k++ i +rtf+Cs++g TRIDC6BG046000.1 11 SFYNKYAKAIGFSIRRGSHHKVKNSPVIQQRTFTCSRQGM 50 5*************************************95 PP
2	FAR1	37.4	8.3e-12	70	122	36	90
FAR1 36 skegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 + g+r+e+k++ ++ + +r+ tr+gC+a++k++++ + ++v+++e HnH+la TRIDC6BG046000.1 70 QLTGFRAEDKRE-DSFSYSRPATRCGCQAHMKISLK-NRLYYVYEFEAAHNHNLA 122 567999999998.99999****************.9*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MQFVSEEEAY SFYNKYAKAI GFSIRRGSHH KVKNSPVIQQ RTFTCSRQGM GCLYFVLVIL 60 LLVSLRYLFQ LTGFRAEDKR EDSFSYSRPA TRCGCQAHMK ISLKNRLYYV YEFEAAHNHN 120 LATGDMALYL RSQRKVTEAQ IASAEVAKSV GISNKATIDL MAKEACGLPN LGFAPEDMLD 180 RYGLGDNTWL QRLFEKREQW ALVYGRNTFS AHMSTTQRSE SMNNELKWYI SIKYDMLTFF 240 EHFERLVADK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-14	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG046000.1