PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG046380.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 260aa    MW: 27405.2 Da    PI: 5.3024
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG046380.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.18e-1775123255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        y+G+r ++ +g+Wv+eIr+p+    + +r++lg++ tae+Aa+a++ a+++l+g
  TRIDC6BG046380.1  75 FYRGIR-CR-NGKWVSEIREPR----KaRRIWLGTYPTAEMAAAAYDVAARALRG 123
                       79***9.66.7*********94....36*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
WYMAEHPSAT SSSAAPPPQV QVQAAAEPAT ELSPGAPASP HSPPVHLGDT VGITTALAAT  60
SSGEPSPRST GKHPFYRGIR CRNGKWVSEI REPRKARRIW LGTYPTAEMA AAAYDVAARA  120
LRGSDAVLNF PGATASRPVP ASASPEDIRA AAAAAAAAAQ LYRPHGGEAA DGTASTAATE  180
EQQRHHGTIT SEEAADDRTP HHQLGNEDFM DEEAIFEMPQ MLRNMAAGMM MSPPRLSPTA  240
SDEWPDPPGA GESLWSYHDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-37ERF family protein